Jpred2 (http://www.compbio.dundee.ac.uk/~www-jpred/) predictions for protein ZP2_MUMU (database accession number AAA40586)

YourSeq     : MARWQRKASVSSPCGRSIYRFLSLLFTLVTSVNSVSLPQSENPAFPGTLICDKDEVRIEFSSRFDMEKWNPSVVDTLGSEILNCTYALDLERFVLKFPYETCTIKVVGGYQVNIRVGDTTTDVRYKDDMYHFFCPAIQAETHEISEIVVCRRDLISFSFPQLFSRLADENQNVSEMGWIVKIGNGTRAHILPLKDAIVQGFNLLIDSQKVTLHVPANATGIVHYVQESSYLYTVQLELLFSTTGQKIVFSSHAICAPDLSVACNATHMTLTIPEFPGKLESVDFGQWSIPEDQWHANGIDKEATNGLRLNFRKSLLKTKPSEKCPFYQFYLSSLKLTFYFQGNMLSTVIDPECHCESPVSIDELCAQDGFMDFEVYSHQTKPALNLDTLLVGNSSCQPIFKVQSVGLARFHIPLNGCGTRQKFEGDKVIYENEIHALWENPPSNIVFRNSEFRMTVRCYYIRDSMLLNAHVKGHPSPEAFVKPGPLVLVLQTYPDQSYQRPYRKDEYPLVRYLRQPIYMEVKVLSRNDPNIKLVLDDCWATSSEDPASAPQWQIVMDGCEYELDNYRTTFHPAGSSAAHSGHYQRFDVKTFAFVSEARGLSSLIYFHCSALICNQVSLDSPLCSVTCPASLRSKREANKEDTMTVSLPGPILLLSDVSSSKGVDPSSSEITKDIIAKDIASKTLGAVAALVGSAVILGFICYLYKKRTIRFNH : YourSeq
ZP2_CANFA   : MACKQKGDSGSPSADWSTYRSLSLFFILVTSVNSVGVMQLVNPIFPGTVICHENKMTVEFPRDLGTKKWHASVVDPFSFELLNCTSILDPEKLTLKAPYETCSRRVLGQHQMAIRLTDNNAASRHKAFMYQISCPVMQTETHEHAGSTICTKDSMSFTFNIIPGMADENTNPGGK..WMMEVDD.AKAQNLTLREALMQGYNFLFDSHRLSVQVSFNATGVTHYMQGNSHLYTVPLKLIHTSPGQKIILTTRVLCMSDP.VTCNATHMTLTIPEFPGKLQSVRFENTNFRVSQLHNHGIDKEELNGLRLHFSKSLLKMNSSEKCLLYQFYLASLKLTFAFERDTVSTVVYPECVCEPPVTIVDLCTQDGFMDVKVYSHQTKPALNLDTLRVGDSSCQPTFKAPSQGLTLFHIPLNGCGTRLKFKGDTVIYENEIHALWTDLPPSTISRDSEFRMTVKCHYSRDDLLINTNVQSLPPPVASVRPGPLALILQTYPDKSYLRPYGDKEYPVVRYLRQPIYLEVKVLNRADPNIKLVLDDCWATPTMDPASLPQWNIVMDGCEYNLDNYRTTFHPVGSSVTYPTHYQRFDVKTFAFISEAQVLSSLVYFHCTALICNRLSPDSPLCSVTCPVSSRHRRASTEEEKMIVSLPGPILLLADSSSLRDGV.DSKGHR...AAGYVAFKTVVAVAALAGLVAALGLIIYLRKKRTMVLNH : ZP2_CANFA
P79160      : MAPKQRGYSWSPPAGWSTYRSISLFFTLVTSVNSIGVSQLVNPAFPGTVICDERGIAVQFRSSPGTKKWHASVVDPFGLDMPNCPYLLDPEKLTMRATYDNCTRRVHGGHQMTIKFINDSAAVRHGAVMYQFFCPAMQVETHGFSAATTCKKDSMSFSLPRIFSGLADATQTEVQMGWSIEVGDGAKAKTLTLSEAMMEGFNLLFDNNRMTFQVPFNATGVSHYVQGNSHLYMMSLKLTFIAPGQKVIFSSRAICAPDP.VTCNATHMTVTIPEFPGKLKSVNFGNQNIEVSQLRDSGIDLEATDGTKLHFSKTLLKTKLSEKCLFHQFYLASLKLTFLLQLETVSMVIHPECLCESPVSIVEQCTQDGFMDFEVYSHQTRPALDLGTLRVGSSSCQPVFEAQSQGLARFHIPLNGCGTRYKFEDDKVIYENEIHARWMDLPPSKISRDSEFRMTVKCSYSRNDKLLNINVESLTPPVASVRSGPFTLILQSYPGNSYQQPYENNEYPLVRFLRQPIYMEARVLNRDDPNIKLVLDDCWATSTMDPDSLPKWNIVVDGCAYNLDNYLTTFHPVGSSVTHPDHYQRFDVKAFAFVSEAHMLSRMVYFHCSVLICNRLSPDSPLCSVTCPVSSRHKRATNEAKTMTVSLPGPILLLSDDFSFRGVGTDTKGHK...TTGDVASKAVAAVATLAGVVATLGFICYLCKKR.IVSNH : P79160
O54767      : MARWQR...........VYWLRSLFFALVTSVNSLSLPQSENPAFPGTLICDKDEVRVEFSSRFDMEKWNPSLVDTFGNEISNCTYALDLEKFILKFPYETCTIKVIGGYQVNIRVQDTNADVSYKDDVHHFFCPAIQAEIHEVSEIVVCMEDLISFSFPQLFSRLADENQNVSEMGWIIKIGNGTRVHTLPLKDAIVQGFNLLIDSQKITLHVPANATGVAHYVQESSYLYTVQLKLLFSSPGQKITFSSQAICAPDLSVACNVTHMSLTIPEFPGKLKSVGFGQRNIPEDQWHANGIDKEATNGLRLHFRKSLLKTKPSEKCPFYQFYFSSLELTFNFQGDMLSTVIDPECHCESPVSIDELCTRDGFMDFEVYSHQTKPALNLESLLVGNSSCQPIFKVQSLGLARFHIPLNGCGTRQKFEGDKVIYENEIHALWENPPSNIIFRNSEFRMTVRCHYIRDSMLLRAHIKSHSSPVASVKPGPLALVLQTYPDISYQRPYRKNEYPLVRYLRQPIYMEVTVLNRNDPNIKLVLDDCWATTFEDPASVPQWQIIMDGCEYELDNYRTTFHAANSSAAHSGHYQRFDVKTFAFVSESRGLSSLIYFHCSALICNQA..S.PLCSVTCPAPLRNKREASKEGTMTVSLPGPIILLSDDSSSKGVMPDSYEIT.....KDIASKTLGAVAALVGSAVIIGFICYLHKKRIVRFNS : O54767
ZP2_PIG     : MACRHRGDSGRPLASW...RSLLLFFPLVTSVNSIGVNQLVNTAFPGIVTCHENRMVVEFPRILGTKIQYTSVVDPLGLEMMNCTYVLDPENLTLKAPYEACTKRVRGHHQMTIRLIDDNAALRQEALMYHISCPVMGAEPDQHSGSTICMKDFMSFTFNFFPGMADENVKRDSKMGWSLVVGDGERARTLTFQEAMTQGYNFLIENQKMNIQVSFHATGVTRYSQGNSHLYMVPLKLKHVSHGQSLILASQLICVADP.VTCNATHVTLAIPEFPGKLKSVNLGSGNIAVSQLHKHGIEMETTNGLRLHFNQTLLKTNVSEKCLPHQLYLSSLKLTFHSQLEAVSMVIYPECLCESTVSLVELCTQDGFMDVKVHSHQTKPALNLDTLRVGDSSCQPTFKAPAQGLVQFRIPLNGCGTRHKFKNDKVIYENEIHALWAD.PPSAVSRDSEFRMTVRCSYSSSNMLINTNVESLPSPEASVKPGPLTLTLQTYPDNAYLQPYGDKEYPVVKYLRQPIYLEVRILNRTDPNIKLVLDDCWATSTEDPASLPQWNVVMDGCEYNLDNHRTTFHPVGSSVTYPNHHQRFDVKTFAFVSGAQGVSQLVYFHCSVFICNQLSPTFSLCSVTCHGPSRSRRATTEEEKMIVSLPGPILLLSDGSSLRDAV.NSKGSR...TNGYVAFKTMVAMVASAGIVATLGLISYLHKKRIMMLNH : ZP2_PIG
Q9W7E4      : ..MPSHCNMRKPELLNLMAAVSVLSQAWPNVKHGLQSTNGVRSDCAGNLMRLSLDEALAVGNQLQVEAINTQRILVTPSLAAQCGYSMESDPWGNTRIYMSLLGCFMVSKDESTFSTSLKLHMYKHSPSDVVSHDVTQTCYSWAFRDVLCDRNYMEVSAHIAPSQQTKGQVQKDNTGIWKMTFYTPEPVAMVLKEAEQAGYGATMRQTRLAIRSPYHTSELKVSVYHKTQEGLNVVNLAAACPTGGILFTDEFISWHIPRRVTPLTEGKVKIVELYMGINGQRLEKAQIAARTFSTGVLTVEECNAKGFAVQEHLLSNTLTGTCDQEHFFVPELGETLAYQDNGTHFSIVVPYAAFELITTNTRCYSNGTISAIAVKVESVPNLSPSWLTLKDQSCTPAFID..DRFAHFVFHADSCGTTRLFFDNYMMYENEIRLNFNRKVAYTSPVDPDYKQTISCYYVVNTQRISFASQPLHEPKAEIGFGHLVVQMRLAQDASYQIFYQTEDYPVQKFLREPLYFEVELMQSRDPKLELVLENCWATSKEERNSLPSWDIIINGCENPDDSYAAVFHPVMSRVSIPSHVKRFSIMMFAFIQNDQVLKDEIHVHCNVVICDANTPAEGICKGQCGYSSGIKAHTKKGQRPQSSTNHKQISSGRILNN..................................................... : Q9W7E4
O73735      : MGRPAMIPIHVP.....KYFTKAWFFIFGCFLVSL.CEAMETLDFPGSVTCLNDKILVKKPKGLRLNAWQLHIVDSAGVQILDCGHFVDGK..TLTVPYK.CTEYQTGRHIFQIAFSKS..SMGDRILPYRISCDGLQADPG..SSVVTCTKDSMTVRIPRTLSGFDDEIPVAPS.FWDLEVKFTGQTSLLGMSEARQRGYQFSSDPYYLTVQASYSAFGLNVFNFENQRLYVADLRLVSQFGSPRISIDTPMICARDS.PSCNSTHATVLIPFFGGVLTGINVNSVNIQLSSLQQHGITLDSRNGYRLYIKRSTLKGDRND..........VLVLTFIYYGKTVPMLISLVCSVDPTGHTDSACTLDGHMDIEVISTITKPELNLTTVKLRDGACQPSQ..ITNNFLRFHVPLNGCGMTVKIVGTKVFYENEIHALWKDFPPRRISRDSEFRQTIRCYYNTGNASVIVNVWTLPPPVSARTDGPLTLVLNVYPDVSYGTAYSNNQYPVVKTLLDPIFLEVQVLNRNDPNIELVLDDCWATMTSNPNSTPQWNVVVDGCQEEMDNLWTVFHPVGMNVARPSHRKRFEVKTFAFVLGGDVLSNLVYFHCHAIICNKLAPDFSLCSKTCSVGRRKRDESMYRESSTVSLSGPILIVDLESSTQNKD.HTSSVG......RLAVGALFILGFVAVVVFALLLITVFKRRSTLSTFC : O73735
O77686      : MWRRFFGVRLTGAKGTCPSPQLPWLFCLVALVTSAVVGNFSTTSFPGTVTCYDDEMKIGFPEDLGNKSWQAYVVDSFGNEIFRCAHVVTSENLILRATYKSCAERVHGTYRVNLKFLPN.ETTSNQVVTYQVSCPAIQADVLEMLAATNCTKDFMSVSFSQILPSFDDETMGEPQVAWTVIVGYSPRMQTLTLQEAMQQGYSFVIENSKIILRVSFNAAGVLHYEQENNHLYTVALQLTYGPPEQRLTLSSRMVCILGP.VTCNSTHMTLIIPEFPGALTAISIENRNVPVNLSKTSGVAVESRNGSRLHFNKRILKSKMSESGAGVQFYLPSLKLRFQYYGEVVSVIIYPEF.CESPVSVVGTCTSDGFMDFEVYSHQTKPALNLDTLQVRDTACQPAFKNPSQDMVRFHIPLNGCGTRAKFEGGQAIYENEIHALWADLPPNKITRDSEFSLTVRCYYSGTDLMVRTNISSPPPPIVSVKPGPLSLVLQIYPDESYLQPYRDDQYPIVRYLRQPIYMEVQVVNRNDPNIKLVLDDCWATLSVDPMSLPRWNVIVDGCDYTLDNYRTKFHHVGSSVNYPNHYQRFEVTTFAFVSGGQALSSLIYFHCSVLLCDQFHPDSPLCSVTCPGSSRTKRDIIEEKSTIASLPGPVFLVSDQASFRGRT.NTEGPWY..EGTSIALQVGSILIAEIFFVAVLCLVKCMPGRTRAVS.. : O77686
ZP2_RABIT   : .............................................PGTVTCNENEIIVEFPSYVGTKTLHASVVDPLGVEMLNCTYILDPEKLTLRVPYKACTRAVHGGYQMSIRVMNNSAALRHTDVEYQFFCP...VETLEFSKSAACTKDFMSLSFPHIPTGLGDSTMVESQMGWMVQAGHGPGAQTLSLEEAKGQGFGVLIDDNKMTLSVLLNATGVTHYVEGTSHLHTMFLKLSLVSPGQKMPFPSRAICLSGP.VTCNATHMTLTIPEFPGKLESVSIENRNITVSQLHDQGIDVEAINGLRLHFSKTVLKTKFSEKCLHDQLYISSLKLTFNLELDTVSTVINPECPCDSPASIVELCTQDGFMDFEVYTHQTKPALNLDTLRVGSSSCQPVFKAQSQGLVRFRIPLNGCGTRHKFEDEKVIYENEVHALWENLPPSKISRDSEFRMTVQCYYTRDDMLLNANIKSLPPPVASVKPGPLALSLQTYPDESYQQPYRVNEYPIVKYLRQPIYMEVRVLNRNDPNIKLALDDCWATSSMDPASLPKWSIVMDGCEYSLDNYQTNFHPVGSSVTHPEHYQRFDVKTFAFVSEAQARSSLVYFHCSALICNQHYPDSPLCSVTCPGSSRHRRANTEEERVTASLPGPILLLPNGSSFRGVG.DSKEHG...MAGDVTSKTMAAVAAVAGVVATLGFISYLCKKRTMMLSH : ZP2_RABIT
Q90311      : ...........................................................FPLQKPVQRLT....N.QQFPLEKPVQQLTNQQFPLQKPVQQLTNQQFPLQKPVQQLTNQ.........QFPLEKP.............VQQLTNQQFPLQKPVQQLTNQQFPQKP...VQQLTN....QQFPLEKPVQQLTNQQFPLQKPVQQLTNQQFPLQKPVQQLTNQQFPLQKPVQQLTNQQFPLEKPVQQLTNQQFPLQKPVQQLTNQQFLLQKPVQQLTNQQFPLPKPVQQLSKPQITKPVKQQFPKPVVQTEPFDKCVVADFEQIQCGPPGISGAECEAINCCFNG.QHCFYGRAVQCIRDGQFVVVVSRDVILPRLSLDSVHLLGGNDPPCAPVSTPSFVIYQFPVTACGTSVMEDGGYVVYENRMTSSYEVEPYGSITRDSHFEFLFQCRYSGTVEALVVEVNSVPPPPPVAAPGPLRVELRLANDEAYTSYYSDADYPITKVLREPVYVEVHIMERTDPNIVLMLGHCWATSTPNPLSLPQWDLLIDGCPYRDDRYLTTLVPVTSGLQFPTHYKRFIVKMFTFVDPAAALQETIFIHCSTEVCHPSSGS...CEQSCTRKRRDTRIVSGEQTVVSSGEVTMVM............................................................ : Q90311
O54766      : ..................................................................MAWG....CFVVLLLLVAAPLRLGQHLHLKPGFQYSYDCGVQGMQLLVFPRPN......QTIQFKVLDEFG..........NRFEVNNCSICYHWVISEAQKPAVFADY............KGCHVLEKQDGRFHLRVFIQAVLPNGRVDTAQDVTLICPKPDHILTPESYLAPPTTPQPFIPHTFALHPISGHTLAGSGHTGLTTLYPETHPTPAPPSSEPGPVG.PTVPQSQWGTLGSWELTELDSIGTHLLQERCQVASGHIPCMVKGSSEEACQQAGCCYDNTKMPCYYGNTLQCFRSGYFTLVMSQETALTHVMLDNVHLAYAPCPPTQK..TSAFVVFHVPLTLCGTAIQVVGKQLVYENQLVSNIEVQPQGSITRDGVFRLHVRCIFNASFLPIRASIFSPQPPAPVTRSGPLRLELRIATDKTFSSYYQGSDYPLVRLLQEPVYIEVRLLQRTDPGLALMLHQCWATPSASPFEQPQWPILSDGCPFKGDNYRTQMVAADATLPFWSHYQRFTIATFTLLDSSNALRGQVYFFCSASACHPVGSET..CSTTCDSEIARHRR..SSGHHNSTIRALDIVSSPGAGFEDAP.KLEPSG...STRNSGSRPLLWVLQLLALTLVLGDGVLVGLSWAWAWA. : O54766
consv       : ---------------------------------1------------2-1--------1--------3252---13-33326-264133334---55-353-431232314214522212---------1216124---1---------25326354624132442334241-1---------------1444735424254414311225342231354282222211444153-4352-321242634-315522-23-135425143835444-5122441434-55121-21114421323251252214166422-43-1--------27112311213431447-125-4123423322-426-3735261413436183535828225555-44----127528262664--73142142466---67242622-6322433751835364-184241118241415113--41231-27282864554168423-2126--8585-46-886-7387552--391-6-13----32154154-4-38847--2312-54173731735364333-26--2846-7782241634238666-3616-321--3--1-326--1123-42---1223-5575222364------------------131-----1-------------1--1---------------- : consv

            : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281-------291-------301-------311-------321-------331-------341-------351-------361-------371-------381-------391-------401-------411-------421-------431-------441-------451-------461-------471-------481-------491-------501-------511-------521-------531-------541-------551-------561-------571-------581-------591-------601-------611-------621-------631-------641-------651-------661-------671-------681-------691-------701-------71- :
OrigSeq     : MARWQRKASVSSPCGRSIYRFLSLLFTLVTSVNSVSLPQSENPAFPGTLICDKDEVRIEFSSRFDMEKWNPSVVDTLGSEILNCTYALDLERFVLKFPYETCTIKVVGGYQVNIRVGDTTTDVRYKDDMYHFFCPAIQAETHEISEIVVCRRDLISFSFPQLFSRLADENQNVSEMGWIVKIGNGTRAHILPLKDAIVQGFNLLIDSQKVTLHVPANATGIVHYVQESSYLYTVQLELLFSTTGQKIVFSSHAICAPDLSVACNATHMTLTIPEFPGKLESVDFGQWSIPEDQWHANGIDKEATNGLRLNFRKSLLKTKPSEKCPFYQFYLSSLKLTFYFQGNMLSTVIDPECHCESPVSIDELCAQDGFMDFEVYSHQTKPALNLDTLLVGNSSCQPIFKVQSVGLARFHIPLNGCGTRQKFEGDKVIYENEIHALWENPPSNIVFRNSEFRMTVRCYYIRDSMLLNAHVKGHPSPEAFVKPGPLVLVLQTYPDQSYQRPYRKDEYPLVRYLRQPIYMEVKVLSRNDPNIKLVLDDCWATSSEDPASAPQWQIVMDGCEYELDNYRTTFHPAGSSAAHSGHYQRFDVKTFAFVSEARGLSSLIYFHCSALICNQVSLDSPLCSVTCPASLRSKREANKEDTMTVSLPGPILLLSDVSSSKGVDPSSSEITKDIIAKDIASKTLGAVAALVGSAVILGFICYLYKKRTIRFNH : OrigSeq

jalign      : ----------------HHHHHHHEEEEEEEEEEEEE-----------EEEE----EEEE------------EEE-----------------------------EEE----EEEEEE------------EEEEE--------------EEEE--------------------------EEEEE-----HHHHHHHHHHHH--HEEH------EEE-------EEEE------EEHHHHEE-------EEE---EEE------EE-----EEE---------------------------------------HHH------------HHHHHHH-----HHH----EEEEEE---------EEEEEE-----EEEEEEE-----------EE----------------EEEEEE--------EEE---EEEEEHHHHHHH-------------EEEEEEEEE----EEEEE----------------EEEEEE-----------------EEEE-----EEHHHEH------EEEEE----------------EEEEE---------EEEEEEE------------EEEEEEEEE---H-H---EEEEEEEEEEE----------EEE----------------EEE-----EEEE------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH---EEE--- : jalign
jfreq       : ---HH------------EEEE-EEEEEEEEEEE-E-EEE---------EEE----EEEE---------EEEEEE-----------EE------EEE-----EEEEE---EEEEEEE------------EEEE-------------EEEEEE--------------------------EEEEE----HHHHHHHHHHHH---EEEE----EEEEEEE----EEEEE----HHHHHHHHHE------EEEE----EE-------------EEE--------EEEEE-------------------------E---EEE------------EEE------E------EE--------------EEEEE----EEEEEEE-----------------------------EEEEEEE-------EEEE---EEEEEEEEEE--------EEE----EEEEEEEE-----EEEEEEE--------------EHHHHEE----------------EEEE---EEEEEEEEE------EEEEEE-E-------------EEEEE----------EEEE-------------HHEHHEEEEEE--------EEEEEEEEEE------------------------------EEEE----EEEEE--------------------------------EHEE----HHEHEEHHH---EEEE-- : jfreq
jhmm        : -------------------HHHHHHHHH--EEEEEE------------EEE---EEEEE-----------EEEEE----------------------HHHHHHHHH----EEEEEE-------------EEE---------HHHHHEEEE-----EE------------------EEEEEEEE-----EEEEE-HHHHH---EEE----EEEEEE-----EEEEE-----EEEEEEE---------------EE--------------EEEEEE------------------------EEE-------EEE-----------------EEEEE------E---EEEEEEE-------------EEEE--EEEEEEEEEEE---------E----------E-----EEEEEEE------EEEE---EEEEEE-E------------------EEEEEEEEE---EEEEEE---------E-----EEEEEEE---------------EEEEEE---EEEEEEEE------EEE--------------------EEE---------EEEEEEE-----------E-EEEEEEEEE--------EEEEEEEEEEE---------EE-E---------EEE----EEEE----EEEE-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHH---EEEE--- : jhmm
jnet        : -------------------HHHHHEEEEEEEEEEEE-----------EEEE----EEEE-----------EEEEE----------EEE-----EEEE---HHHHHH----EEEEEEE-----------EEEEE-------------EEEEEE--EEE-------------------EEEEEEE----EEEEHHHHHHH----EEE---EEEEEEEE----EEEEEE---EEEEEEEEEE-------EEE----EE-------------EEEE------EEEE--------------------------EEE--EEEE-----------EEEE------------EEEEE---EE------EEEEE----EEEEEEEE------------E---------------EEEEEEEE-----EEEEE---EEEEEEEEEEE--------EEE---EEEEEEEEE----EEEEEEE--------E-----EEEEEEE---------------EEEEEE--EEEEEEEEE------EEEEE--EEE-----------EEEEE----------EEEEE------------EEEEEEEEEEE--------EEEEEEEEEEE----------------------------EEEEE----EEEE--------------------------------HHHHHHHHHHHHHHHHHH---EEEE-- : jnet
jpssm       : -----------------------HEEEEEE----E------------EEEE---EEEEE-----------EEEE------------EE----EEEEEE-HHHHHHHH--EEEEEEEE-----------EEEEE-------------EEEEEE-EEEE-------------------EEEEEEE----------HHHHH----EEE---EEEEEEEE---EEEEEEE---EEEEEEEEEE-------EEE----E--------------EEEE------EEEE--------------------------EEE--EEEE------E--------------------E--EE---EE------EEEEE----EEEEEEEE-------------------EEEEE----EEEEEEEE-----EEEEEE--EEEEEEEEEEEE--------EE---EEEEEEEE-----EEEEEE---------------EEEEEEE----------------EEEE----EEEEEEEE-----EEEEEE--EEEE----------EEEEE---------EEEEEEE----------EEEEEEEEEEE---------EEEEEEEEEE-----------------------------EEEEE----EEEE----------------EE---------------------HHHHHHHHHHHH---EE--- : jpssm
mul         : -----------------------EEEE---------------------EEE-----H-H-------------E-------H--E--------HHHH------E-EE----EEEEEE------------EEEEE-----HHH-------E------EEEE------------------EEEE---------HHHHHHHHH----E------EEEE------EEEE-------EEE-EEEEE------EEE--EEEEE-----------EEEEE-----------------------------------HHHH--HHHH--------HHH-----HHHHHH------EEEEE-----------EEE-------HHHHH------------EE----------------EEEEEE---------HH--HEEEEH--HHHHH--------------HEEEEEE-----EEEE-----------------EEEEEEE----------------EEEEEE--EEEEEEEE------EEEHHHH-HH------------EEEE------------EE---------------H-HHHHHHHH------EEEEEEE-EEEE---------EEEEE---------------EE------EEEE------------------------HHHHHHHHHHHHHHH-HHHHEEEHH---------- : mul
nnssp       : ----------------------EEEEEEE-------------------EEE----EEEE----------------------------------EE----------------EEEEEE-----------EEEEE--------------EE------EE--------------------EEEEE------EEEEHHHHHH----EEE----EEEEEE------EEE------EEEEEEEEE-------EEE---EE--------------EEEE-----------------------------------EEEE-------------EEEEEEE---EEEEE------EEEE-----------EE---------EEEEE------------EE-----------------EEEEE---------EE---EEEE---------------------EEEEEEEEE----EEEEEE---------------EEEEEE-----------------HHHHH----EEEEEEE-------EEEE-----------------EEEE---------------------------------EEEEE--------EEEEEE-EEE---------EEEE-----------------EEEE----EEEE---------------HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH-----EEEEE- : nnssp
phd         : -------------------HHHEEEEEEEEEEEE-EE----------EEEE---EEEEEEE----------EEE-------------E---------------E------EEEEEE------------EEEEE---------------EEEE---EEEE------------------EEEEEE---------HHHHHHH----EEE----EEEEEEE---EEEEEE----EEEEEE-EEE-----EEEE---EEEE------------EEEEE-------------------------------------E----------------EEEEEEEEEEEEEE--EEEEEE--------------EEE----EEEEEEEE-----------EE---------------EEEEEEE-----EEEEE---EEEEEEE------------EE----EEEEEEEEEE---EEEEE----------------EEEEEE----------------HHHHH----EEEEEEEEE-----EEEEE-----------------EEEE------------EEE--------------EEEEEEEEEE------EEEEEEEEEEEEE----------------------------EEE-----EEEEE----------------------HHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEE- : phd
pred        : -------------------HHHHHHHHHEEE----EEE----------EEE---EEEEEE----------EEE----------EEEE----EEEEE----EEEEEE----EEEEEEE----HHHHHHHHEEE-------------EEEEE---------------------------EEEEE------HHHHHHHHHH----------EEEEEEE-----EEEEE-----EEEEHHHHH------EEEE--EEEE------------EEEE--------EEEE------------------------EEEE--EEE------EEEEHHHHHHHHHHHHHHH--EEEEEE---------------------EEEEEE-----------EEEE-------------EEEEEEEE-------EEEE---EEEE--HHHHHHH------------EEEEEE--------EEE----------EEE----EEEEEEE---------------HHHHHH-----EEEE---------EEEE----------------EEEEE---------------------------EEEHHHHHHHHH-HHHHHHHEEEEEEEEEE------------------HHHHHHHHHH-EEEE----EEEEE----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ : pred
zpred       : -----------------------------------------------------------------------------E-HEEEEEE-HHHHH--EE------EEE-----EEEEEE-------------EEEE--------------HHHH---EEEE------------------------------HEHHHHHHHHH-EEEEE----EEEEE-----EEEEEE-----EEEEEEEEEE-----EEEEE--EEE-------EE---EEEEEEEE-----EEE-----------------EEH---HHHHHHHHHHH--------------------EE-----EEEEEE----------EEEEEE---HEHHHHHHH----EEEEEEEEE----EEEEEE-----EEEEEE-----EEEEE----HHHHHHHHHHHH-------EEE----HEEEEEE-----EEEEEE-------EEEEE--EEEEEEEEE---EEEEE----EEEEEEEEEEEEEEEEEEEH-----EEEEEHHHHHE----------EEEEEEEEE------EEEEE-----------EEEEEEEEEHHHHHHHHHHEEEEEEEEEEEEE--------EEEEE------------HH-EEEE---EEEEE------------------------------HHHHHHHHHHEEE---------------- : zpred

Jpred       : -------------------HHHEEEEEEEEEEEEEE-----------EEEE----EEEE-----------EEEE-------------------EE--------E------EEEEEE------------EEEEE-------------EEEEE----EE--------------------EEEEEE-----EEEHHHHHHH----EEE----EEEEEEE----EEEEE-----EEEEEEEEE-------EEE---EEE-------------EEEE------------------------------------EEE-----------------EEE-------------EEEEE-----------EEEEE----EEEEEEEE------------E----------------EEEEEEE------EEEE---EEEEEEEE------------E----EEEEEEEEE----EEEEEE---------------EEEEEEE----------------EEEE----EEEEEEEE------EEEEE----------------EEEEE----------EEEEE------------EEEEEEEEEEE--------EEEEEEEEEEE-----------------------------EEEE----EEEE--------------------------HHHHHHHHHHHHHHHHHHHHHHHH---EEEE-- : Jpred

PHDHtm      : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTTTTTTTTTTT----------- : PHDHtm
MCoil       : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : MCoil
MCoilDI     : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : MCoilDI
MCoilTRI    : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : MCoilTRI
Lupas 21    : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 14    : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 28    : ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

PHDacc      : --U---B--U---B-UBBBBBBBBBBBBBBBBBBBBBB-BB-B-B-BBBBBB---BBB-BB--B-B--BUBBBBBBBBB-BB-BBBBB-B--BBB-BBU-BBBB-BBBBB-BBB-BB---B-B---BBBBBBBB-BB-B-BB-BBBBBBBB--BB-BBBBBBB--B---------BBBBBBBB----BBBBBB--BBB-BBBBBB-BB-BBB-BBB-B-BBBBBB--B--BBBBBB-BBB-U----BBBBB-BBBBB-B-BBBBB-UBBBBBB-B---B-BB-B----B-BB-BU--BB-B-BU--B-BUBB--BB---B---BBBB-BBBBBB-BBBBB-B-BBBBBBBB-BBB-BBBBBBBBBBU-BBBBB-BBB--B--BB-B-BB-BB---B--BB-BUB-BBBBBBBBB-BB-B-B-B----BBB-BUBUBBB--U----BB--B-BUBBB-BBBBUBUBBBBBBB--U----BBB----BBBBB-BU---BUBUBU----UBBB-BB---BUB-BUBB------B-BBB--BBB-B------U--BBBBB-BB-B-B--BUBBBUBBBBBBBBB-UU--B-B-BBBBBB-B-BBBBBBBBBBBBBBBB-BU--U-BB-B-B-B-U-----------BBBBB-BBBBBBB--B-B--U---B--B---BBBBUBBB-BBBBBBBBBBBBBBBBBBBBBB--UBBBB-- : PHDacc
Jnet_25     : BB-B------------B-BBBBBBBBBBBBBBBBB-B-------BBBBBBB----B-B-BB--B-B--BBBBBBBBB-B-BB-BBBBB----B-B-BBB--BB--BB--B-B-BBB----B-B----B-BBBBBBB--BB---BB-BBBB---BB-BBB--BB--B---------BBBBB-B-------BB-B--B---BB-BBB--BBBBBBBBB-B--BB-BB----BBBBB-BBB--------BBB---BBBB--B--BB---BB-BBBB-B---B--B-B----B-B--B----B-------B-B-B----B-------B----BBBBBB---BBB---B-BBBBB--B-B-B-B-B-B-BB--BBBBBBBB---B---B-B-BB-B----B---B---B--BBBBBBBB-BBBBBBBB----BBBBBBBBB-B-------BBBB--B-BBBBB-B-----BB-BBB-B----------B-BBBBBBBB---BBB-BB----BBBBBBB-BBBBBBBBBB---B--B-BBB-BBBBB--------B-B-BBB-BB---B--B-B-BBBB-B-B-BB-B--BB-B-BBBBB----BB--BBBBBBBBBBBB--------B---B-----------------BBB-B-BBBB---------------B--------BBB-BBBBBBBBBBBBBBBBBBBBBB--BBBBBBB : Jnet_25
Jnet_5      : ----------------------BBBBBBBBB---B-----------B-B------B-B---------------BB--------B--------B-B------B---------B-B-----------------B---B------------------B-B-B------------------B-B-B--------B--------BB---B----B-B-B------B------------B-B-B--------B-B----B---------------B-B--------------------------------------------------------------------------BB----B-----------B-------B-B-------------B-----------------BB-B-B-B----B--------BBB-B-B-B---------B-----B-B-B-B--------B-B-B--------------B-B-B-------B----------BB--B---B-BBB-B-------B-BBB--B---------------BB------------B--B--------------B-B-BBBB----------B-BBB-B-BB---------B-----------------------------B-------------------------B----B-BBBB-BBB-BBBBBBBBB-----B-B-- : Jnet_5
Jnet_0      : ------------------------B-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------B--------------------------------B-------------------BBB-------------------------B---------------------------------B------------------------------B---------------------------------B------------------------------------------------B-B---------------------------------------------------------------------------------------------B------------- : Jnet_0

PHD Rel     : 99866788888877655421212357788897311222231269998166524416677414666542420254255541214441105544232455433211111343369984247656654322246424454446554332102120110231123344456556798665258897278743333155656412120242352146775412424888735552234542111127885166423334414777645655531342145674431135557764345445687334437532101121143466655533234432222224320210466851335667985223131034432489961136765666531323557877666786521477762588731553137727988632112258999752235522588999951442576551457999984336998278884466855565776566512322124528999965358998366741433556899877998648853644565645211212366524697543124468998853355441667676677751578899843333577667776677776404404884799835778899999856677665432112787899999976665312355776445765529 : PHD Rel
Pred Rel    : 00777766579999996665588888888857686666678899000007867769998589867655766766898987667666667766666766666555555766559986689665558888555688888567867666587777876666788788888099777776660996799886538858888866656667776609856678866886679996087687666669999698770708789908778666600007899900657868999866555676908666789965555554854699988868577788888787786666578870000888997877766799976699866800989666659598999998877566655609708799887688667908867768888879999776787755576785567876666555760000987600997568006799007770009999667676507680870886590000089706765668999999998690987887778888766778999667709976657777788656686686888880080857809999977777899777777766888560670999600979999777799977766776666658888890999866808076800887877766000 : Predator Rel
Jnet Rel    : 75420789998898873102431035666566310113243588873167278709995136899875322322045533467642306984136623513334203880999998168877765581599812556667866550545660341541364578988778986774189997078831002478343108404774862789986145215789706853677655543069997456058511268887557877435864158851012203688745775557885412678982363212532278851301232540476641115980142323740136898527874068739999855044689864550137999752202286029999993488841799828849999778874258999934623714799999634886033216169997654126783688887516888767766898412886378062588988069974799752203344889999986066507853689961699850668888999733697878853489797997189998788747899999964356998877656467654289963893898229999998777653114213544335422331235540145678888874253656689 : Jnet Rel

Key:
consv      - Conservation number (+) = 0; (-) = 10
phd        - PHD prediction
dsc        - DSC prediction
pred       - PREDATOR prediction
nnssp      - NNSSP prediciton
zpred      - Zpred prediction
mul        - Mulpred prediction
jnet       - Jnet prediction
jalign     - Jnet alignment prediction
jhmm       - Jnet hmm profile prediction
jpssm      - Jnet PSIBLAST pssm profile prediction
jfreq      - Jnet PSIBLAST frequency profile prediction
Jpred      -  Consensus prediction over all methods

PHDacc     - Solvent Accessibility

PHD Rel    - PHD Reliability
PRED Rel   - Predator Reliability
NNSSP Rel  - NNSSP Reliability
PHDHtm     - PHD transmembrane prediction
MCoil      - MultiCoil prediction (+ Dimer and trimer predictions)
Lupas      - Lupas Coil prediction (21,14,and 28 window sizes)

Note on coiled coil predictions  - = < 50% probability
                                 c = >50% <90% probability
                                 C = >90% probability